Collection
Open-source workflow engines and reference pipelines that help research teams run scalable, reproducible analyses across labs, cores, and compute environments.
github.com
A community-maintained RNA-seq pipeline built on Nextflow with extensive quality control and reproducibility support.
Many labs struggle less with algorithms than with repeatability. This page focuses on the workflow layer that makes analyses portable across laptops, HPC clusters, and cloud setups.
Use it when you are standardizing RNA-seq, genomics, or multi-sample pipelines across a research group or core facility.
